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Enrique (Quique) Vidal
From physics and statistics to bioinformatics and genomics through epidemiology. Data scientist helping to ask and answer questions quantitatively. R’ing all the way from data processing to modeling and visualizing. Non-stop-learner.
Education
Universidad Autónoma de Madrid
PhD. in Epidemiology
Madrid, Spain
2011
Anisotropic models to study cancer mortality around poullutant sources
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Thesis text and slides (in Spanish)
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Universitat de València
Degree in Statistics
Valencia, Spain
2006
Universitat de València
Degree in Physics
Valencia, Spain
2005
Consulting Experience
Statistics and bioinformatics
Ferrer Corporate
Barcelona, Spain
2019
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- Multiclass classifier for prediction of tumor origin
- Implementation of a workflow for mutation detection
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Research Experience
Postdoctoral Researcher
Center for Genomic Regulation (CRG)
Barcelona, Spain
Now - 2015
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Acting as head of computational biology for the 4DGenome Unit:
- Implemented a reproducible workflow for genome structure samples
- Developed a bias-correction method for genome structure data
- Visualization tools based on shiny
- Context-specific analysis for the study of the dynamics of genome structure
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Postdoctoral Researcher
Bellvitge Biomedical Research Institute (IDIBELL)
Barcelona, Spain
2015 - 2012
- Integrative analysis of epigenomic data
Postdoctoral Researcher
Principe Felipe Research Center (CIPF)
Valencia, Spain
2012 - 2011
- Implementation of the platform to analyze exomes for rare diseases (CIBERER-BIER)
Bioinformatician / Biostatistician
Principe Felipe Research Center (CIPF)
Valencia, Spain
2011 - 2009
- Network analysis and multilevel modeling in the context of signaling pathways
Biostatistician
National Center for Epidemiology
Madrid, Spain
2009 - 2006
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- Analysis of mortality time-trends
- Disease mapping (spatio-temporal smoothing)
- Assement of risk factors associated with pollution
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Teaching Experience
Biostatistics, Epidemiology and Public Health
Instructor
Castellón, Spain
2017 - 2016
Universitat Jaume I
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Medical degree
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Basic Epidemiology
Coordinator and instructor
Valencia, Spain
2011
Valencian School for Health Studies (EVES)
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Professional training
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Biostatistcis and Epidemiology
Instructor
Madrid, Spain
2009 - 2008
National School of Public Health, ISCIII
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M.S. Public Health
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Statistical analysis with R (2 editions)
Coordinator and Instructor
Madrid, Spain
2009 - 2008
Carlos III Institute of Health (ISCIII)
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Professional training
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Selected talks
Simple statistical models for complex 3D genome data
Statistical Methods for Post Genomic Data
Barcelona, Spain
2019
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OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes
Keystone Symposia: Chromatin Architecture and Chromosome Organization; ISCB Next Generation Sequencing Conference
Whistler, British Columbia, Canada
2019
Awarded with “Outstanding presentation prize”
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Selected publications
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Full list of publications accesible here
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First author publications in peer-reviewed journals
Hormone-control regions mediate steroid receptor–dependent genome organization
Genome Research
2019
Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming
doi.org/10.1038/s41588-017-0030-7
Nature Genetics
2018
OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes
Nucleic Acids Research
2018
Copy number rather than epigenetic alterations are the major dictator of imprinted methylation in tumors
doi.org/10.1038/s41467-017-00639-9
Nature Communications
2017
A DNA methylation map of human cancer at single base-pair resolution
Oncogene
2017